HMM for Sequence Analysis
Definition of Hidden Markov Model
Markov Model
Markov Model to HMM
Generative Grammar
Regular Grammar to HMM
Dynamic Programming Algorithms of Hidden Markov Model
Viterbi Algorithm
Forward Algorithm
Backward Algorithm
Marginalized Probabilities and EM algorithm of Hidden Markov Model
Marginalized Probabilities and Counts
Baum-Welch Algorithm